BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F02SP1|AL425725
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1207 1160 0.0
>3x_Contig1207
Length = 6451
Score = 1160 bits (583), Expect = 0.0
Identities = 605/613 (98%), Gaps = 1/613 (0%)
Strand = Plus / Minus
Query: 181 ggctctcggatccttgttatcagcagctaactgataccatttcatagcattttcagtgtt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6451 ggctctcggatccttgttatcagcagctaactgataccatgtcatagcattttcagtgtt 6392
Query: 241 tggttcacatcctttccccttttcatagaaatatccaactgtgaattgagccttcggata 300
||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 6391 tggttcacaacctttccccttttgatagaaatatccaactgtgaattgagc-ttcggata 6333
Query: 301 acctaacttggccgccctcagcgcccattcaaatgcttcattgtcatcggcaacaaacgc 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6332 acctaacttggccgccctcagcgcccagtcaaatgcttcattgtcatcggcaacaaacgc 6273
Query: 361 aggcttagctccgattagataccatgcacataaccccatcatagcctctggatccycacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6272 aggcttagctccgattagataccatgcacataaccccatcatagcctctggatccccacc 6213
Query: 421 gtgtgatgcaattgtataataatttacactaagaagtgtatcctgtggaactacttcgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6212 gtgtgatgcaattgtataataatttacactaagaagtgtatcctgtggaactacttcgtt 6153
Query: 481 accaacttcgtatattctccccaaatgagtcgcagatggcgtatgtyccaatgatgcggc 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6152 accaacttcgtatattctccccaaatgagtcgcagatggcgtatgtcccaatgatgcggc 6093
Query: 541 ttgtatgtwaagttccatagcatattttctatcggcaatcaagatatcaaggaaaccagt 600
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6092 ttgtatgtaaagttccatagcatattttctatcggcaatcaagatatcaaggaaaccagt 6033
Query: 601 gtcataaatcttcgccatctcatacggagccgcacaagtcaacctgttggcttttgcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6032 gtcataaatcttcgccatctcatacggagccgcacaagtcaacctgttggcttttgcagc 5973
Query: 661 cgcacgagacaaccatttcaaaccgttcttcttcgtattgagatcgtctgaaagacccat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5972 cgcacgagacaaccatttcaaaccgttcttcttcgtattgagatcgtctgaaagacccat 5913
Query: 721 cttagcgtaaaatgcgtacaccccaagtttaaacatggcagctggatggtttctggatgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5912 cttagcgtaaaatgcgtacaccccaagtttaaacatggcagctggatggtttctggatgc 5853
Query: 781 agcaaacttcaaa 793
|||||||||||||
Sbjct: 5852 agcaaacttcaaa 5840
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5502
Number of Sequences: 1807
Number of extensions: 5502
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)